CDS

Accession Number TCMCG016C26384
gbkey CDS
Protein Id OMO54275.1
Location complement(join(7648..7848,8241..8295,8373..8453,8551..8709,8975..9171,9862..10080,10175..10260,11312..11507,12320..12430))
Organism Corchorus capsularis
locus_tag CCACVL1_27922

Protein

Length 434aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014997.1
Definition JAB1/Mov34/MPN/PAD-1 [Corchorus capsularis]
Locus_tag CCACVL1_27922

EGGNOG-MAPPER Annotation

COG_category O
Description Lys-63-specific deubiquitinase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11864        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
ko04621        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map04621        [VIEW IN KEGG]
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004843        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006282        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0008234        [VIEW IN EMBL-EBI]
GO:0008237        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016578        [VIEW IN EMBL-EBI]
GO:0016579        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019783        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031572        [VIEW IN EMBL-EBI]
GO:0031593        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036459        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045739        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0070531        [VIEW IN EMBL-EBI]
GO:0070536        [VIEW IN EMBL-EBI]
GO:0070537        [VIEW IN EMBL-EBI]
GO:0070552        [VIEW IN EMBL-EBI]
GO:0070646        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072395        [VIEW IN EMBL-EBI]
GO:0072401        [VIEW IN EMBL-EBI]
GO:0072422        [VIEW IN EMBL-EBI]
GO:0072425        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0101005        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1902749        [VIEW IN EMBL-EBI]
GO:1902750        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]
GO:2001022        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTTAACACGTGTGAAAATGTCTGAAGATGTTTGGTTAACTTGTCTCACGCATGCATTGTCTACTGAAACTGAAGAGATCATGGGTCTTCTTCTTGGTGATATTGAGTATTCAAAAGATGGAAATGTAACTGCATTGATATGGGGGGCATCACCGCAATCACGGTCCGATCGGCGGAAGGATCGAGTTGAGACAAATCCTGAACAGTTGGCAGCTGCATCTGCGCAAGCTGATATATCCTTAATCTTTGTGCAATTCTATCTTTGTTTTGAAAATTATTTGGTGTTAACTCACTATAAAACTAATGTTCGGACTCAGGCAATGTATCAACTTCTAGATTCTGGATTTATTGGGCTGATATTTTCTTGTTTTAGTGAAGATACAAACAAGGTAGGAAGAATCCAAGTCATTGCTTTTCAGTCGTCAGATGGGAAGCAGAGTCATGTATCAGTTCCTCTTGCAATAACTCCTGTGAATAGAAATTCAGTAATTGATCTTGACTCATCTTTAAGTTCTTCCGATAACGTGGCGATGGCATCGGGATATGGCAAAGTAGGTAGCCCACTTCAAGACACTGGTGATTCCAGATTGGCTCAAGGATCTAACAAGGGTGGGGTGCGAGCTGCAGATATGGGAGGTTTCTTTGCTAATGCTGATGCCAACTATCTAGGGAGAGAGCAAAGAGGAGGAATCTATAATACCAATGATAATAACGTACAGAGTGCTGTTGCTGTTGGTGATATTGACCCCATGGATATGTCAGAAAGCATGCAAGAAGCCATGCACCGCTCAAATTTGGACATTAGTGGTGCGGAGTATGTTAGGAAAGAGATCCCTCTTTATGTGTTGCCAACATCTTCTCTTCTTAATCTTGACTCACCGTTATTGTCATTTACGGATTTGCAACGTGTGCTGTATGAAGAAGAGCGGGCAGCATATAACCAAGCCATCTTGCAAAATATGAGAGATGGGAAAGTGCATCCTCTTTCTTTCATCCATCACACTTCAACATATCAGGCCTCAATGTGCAAGTTAATTGAATATTGTTTAAGTCCTGCCATCAATGCACTTCAGGATCGACTCAAAGAAAATGAAATACGGTTAGCAATGCTGACCAATGAAGCTAAGATTTTGGGGACTGAAGCCTTCAAGGGGAGTGGGCCTAGTTCTCCTCATCATGCTTCATTTCATGGATCCCGAGTCAGTGCTATGTCTGGTCAGAGAGACTCGCATAATTCAGCCGAGCCCTCCAATTTGAGAACATATACTGGAGCTGGGAGCCGAAGCAGAAAACGGTCATGA
Protein:  
MSLTRVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGNVTALIWGASPQSRSDRRKDRVETNPEQLAAASAQADISLIFVQFYLCFENYLVLTHYKTNVRTQAMYQLLDSGFIGLIFSCFSEDTNKVGRIQVIAFQSSDGKQSHVSVPLAITPVNRNSVIDLDSSLSSSDNVAMASGYGKVGSPLQDTGDSRLAQGSNKGGVRAADMGGFFANADANYLGREQRGGIYNTNDNNVQSAVAVGDIDPMDMSESMQEAMHRSNLDISGAEYVRKEIPLYVLPTSSLLNLDSPLLSFTDLQRVLYEEERAAYNQAILQNMRDGKVHPLSFIHHTSTYQASMCKLIEYCLSPAINALQDRLKENEIRLAMLTNEAKILGTEAFKGSGPSSPHHASFHGSRVSAMSGQRDSHNSAEPSNLRTYTGAGSRSRKRS